PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010925687.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family TCP
Protein Properties Length: 568aa    MW: 60279.1 Da    PI: 7.3376
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010925687.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP117.12.2e-36210303292
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.....eaesssssasnsssgkaa 91 
                     +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++a++ai+el+g+++s++s+      ++++   +  n+  g+++
  XP_010925687.1 210 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIRNAQAAIDELAGLPASASSSNppsalNPQETAAA--NQPVGDSS 302
                     79**************************************************************666664332222111111111..22222333 PP

             TCP  92 k 92 
                     k
  XP_010925687.1 303 K 303
                     3 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036349.8E-32210292IPR005333Transcription factor, TCP
PROSITE profilePS5136933.467212270IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 568 aa     Download sequence    Send to blast
MEVTKTLWPV IVVSPSRGGG DGDGILGVGW PSLLEAETRK APTPAPPDTT SRAAEGTREA  60
ARGSRERGIP LAANTKLDGR QKRAAKDLDP RRTPYRPIPN PRGSEREEEE GEQPQEEEQQ  120
PQRFRLRPLH HHQNPPPGDR SYFPSPSSSS SSSPTTASFS DHARPSDRMA EAEGHGYGHQ  180
RQHQRPRFVG GLRGAGEIVE VQGGHIVRST GRKDRHSKVC TAKGPRDRRV RLSAHTAIQF  240
YDVQDRLGYD RPSKAVDWLI RNAQAAIDEL AGLPASASSS NPPSALNPQE TAAANQPVGD  300
SSKKPIPGAE PVASAAFGFG GGGGGGGGSG SFLPPSLDSD AIADTIKSFF PMAAPAATAP  360
SSSPAIGFQN YPSDLASHAS RQDLQLSLQS FQDPIFHSPD PSHHPHSQHH HQDPTPSTQH  420
ALFSVSAHLA YDTASAGWSE QSQRMVPWNV AETSCGGGGG GGGYEFNVPP PAPPQAVPLH  480
PVLGQSQFFT QRGPLQSSNS PAIRAWADPI ASTTDHQMHP ALRPSVSSIG FASGAGFPGF  540
RFPARIQGEE ERDGTSDKPP SASSASHH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010925687.10.0PREDICTED: transcription factor TCP4-like isoform X1
SwissprotQ8LPR51e-89TCP4_ARATH; Transcription factor TCP4
TrEMBLM0SW951e-134M0SW95_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr5P06660_0011e-134(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP58393355
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.32e-41TCP family protein